ccn-tutorial/_quarto.yml at main · BonnerLab/ccn-tutorial · GitHub

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project:
  type: website
  preview:
    port: 4200
  render:
    - index.qmd
    - "pages/*.qmd"
  output-dir: site
  execute-dir: project
  post-render:
    - scripts/move_jupyter_notebooks.py
    - scripts/standardize_jupyter_notebook_cell_ids.py
    - jupyter nbconvert --clear-output --inplace notebooks/*.ipynb
  resources:
    - "resources/*"
filters:
  - black-formatter
  - add-code-files

date: 2023-08-26
date-modified: last-modified
date-format: long
abstract-title: Summary
lang: en-US

website:
  title: "CCN 2023 | Tutorial"
  favicon: /resources/ccn-logo.svg
  navbar:
    background: primary
    logo: /resources/ccn-logo.svg
    search: true
    left:
      - href: index.qmd
        text: Home
      - href: pages/introducing_pca.qmd
        text: Introducing PCA
      - href: pages/exploring_neural_data.qmd
        text: Exploring neural data
      - href: pages/dealing_with_noise.qmd
        text: Dealing with noise
      - href: pages/comparing_representations.qmd
        text: Comparing representations
      - href: pages/analyzing_neural_networks.qmd
        text: Analyzing neural networks
      - href: pages/reference.qmd
        text: Reference
    tools:
      - icon: github
        href: https://github.com/BonnerLab/ccn-tutorial
  repo-url: https://github.com/BonnerLab/ccn-tutorial
  repo-actions: [edit, issue]
  search:
    type: textbox
  back-to-top-navigation: true

bibliography: references.bib
citation-location: document

format:
  html:
    theme:
      light: flatly
    grid:
      sidebar-width: 300px
      body-width: 800px
      margin-width: 300px
      gutter-width: 3em
    code-block-bg: true
    highlight-style: atom-one
    html-math-method: katex
    smooth-scroll: false
    toc: true
    toc-depth: 4
    toc-title: Contents
    toc-expand: 1
    code-fold: true
    code-copy: true
    code-tools:
      source: repo
      toggle: true
      caption: Code
    fig-align: center
    fig-format: svg
    fig-responsive: true
    fig-width: 7
    fig-height: 5
    notebook-links: true
    citations-hover: true
    footnotes-hover: true
    keep-ipynb: false
    title-block-banner: true
  ipynb:
    code-annotations: none

execute:
  enabled: true
  cache: true
  warning: false
  error: false
jupyter: python3