Description
Filter visualization by cluster size designated by user (i.e. clusters of 3+ / 4+ proteins)
Refactor code to use existing dependenciesMake it clear that the visualization was generated (rather than having to click the visualization tab after)Edges table - Removing non-highlighted rowsMaking nodes table collapsableGroup comparison data table - Keep the full table in the backend
Add toggle / selector to use cytoscape desktop or shinyJS for visualization. Disable cytoscape desktop button in prod.Linking the new step to the pipeline (integrating step 5 to steps 3 and 4)
MSstatsBioNet + MSstatsShiny: Refactor node (log2FC, Protein) and edge (interaction) column names
Add unit tests in MSstatsBioNet for subnetwork query.
Replace evidenceLink with https://discovery.indra.bio/search/
Highlight node when clicking on node table
Save as HTML file iteratively with specified settings
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Refactor code to use existing dependenciesMake it clear that the visualization was generated (rather than having to click the visualization tab after)Edges table - Removing non-highlighted rowsMaking nodes table collapsableAdd toggle / selector to use cytoscape desktop or shinyJS for visualization. Disable cytoscape desktop button in prod.