Issues

• Give exported run artefacts a content identity for external grading

  HolobiomicsLab/Mimosa-AI#214 · Filter by author lfnothias opened on Sep 11, 2026

• Runner: enforce workspace confinement and egress policy for evaluation

  HolobiomicsLab/Mimosa-AI#213 · Filter by author lfnothias opened on Sep 11, 2026

• ASTRA capsules describe pre-existing workspace files as artefacts produced by the run

  HolobiomicsLab/Mimosa-AI#204 · Filter by author lfnothias opened on Aug 29, 2026

• Reproduce command is emitted for recipes that are not executable

  HolobiomicsLab/Mimosa-AI#203 · Filter by author lfnothias opened on Aug 29, 2026

• ASTRA capsules carry no tool-health signal, so a dead search reads as absent data

  HolobiomicsLab/Mimosa-AI#202 · Filter by author lfnothias opened on Aug 29, 2026

• ASTRA export inflates decisions and options because dedup is keyed on the identifier string

  HolobiomicsLab/Mimosa-AI#201 · Filter by author lfnothias opened on Aug 29, 2026

• Observatory: reviewer annotations on runs and decisions

  HolobiomicsLab/Mimosa-AI#200 · Filter by author lfnothias opened on Aug 26, 2026

• csv_mode embeds local filesystem paths from the URLS column verbatim in prompts

  HolobiomicsLab/Mimosa-AI#199 · Filter by author lfnothias opened on Aug 26, 2026

• A step passes the verifier while failing to produce the output its plan declared

  HolobiomicsLab/Mimosa-AI#196 · Filter by author lfnothias opened on Aug 22, 2026
  2

• Verifier scores rank a fabricating run above an honest one on the same task

  HolobiomicsLab/Mimosa-AI#195 · Filter by author lfnothias opened on Aug 22, 2026

• The per-claim verifier cannot distinguish obtained data from constructed data

  HolobiomicsLab/Mimosa-AI#194 · Filter by author lfnothias opened on Aug 22, 2026

• Planner forwards all prior task outputs to every task, regardless of depends_on

  HolobiomicsLab/Mimosa-AI#193 · Filter by author lfnothias opened on Aug 21, 2026
  1

• Capsule and workspace names are not deterministic across processes

  HolobiomicsLab/Mimosa-AI#190 · Filter by author lfnothias opened on Aug 16, 2026
  1

• csv_runs_limit is compared to the row index, so resuming selects too few rows or none

  HolobiomicsLab/Mimosa-AI#188 · Filter by author lfnothias opened on Aug 16, 2026

• Config.from_json ignores unrecognised keys without warning

  HolobiomicsLab/Mimosa-AI#183 · Filter by author lfnothias opened on Aug 14, 2026

• literrature_grounding cannot be disabled from a config file

  HolobiomicsLab/Mimosa-AI#182 · Filter by author lfnothias opened on Aug 14, 2026
  1

• Benchmark integrity: Perspicacite web-search grounding can leak source-paper answers; propose per-side KB selection

  enhancement
  HolobiomicsLab/Mimosa-AI#167 · Filter by author lfnothias opened on Jul 3, 2026
  2

  

• Agent context grows unbounded on long runs (no compaction)

  invalid
  HolobiomicsLab/Mimosa-AI#161 · Filter by author lfnothias opened on Jun 29, 2026
  4

• Add workflow admission cards before similarity-based template reuse

  idea
  HolobiomicsLab/Mimosa-AI#154 · Filter by author sunghunkwag opened on Jun 12, 2026
  2

• Evaluation with ARC-Bench ?

  ablation/xp/eval
  HolobiomicsLab/Mimosa-AI#148 · Filter by author Fosowl opened on May 28, 2026

• Evaluation pipeline for Metabolomics using AgenticScienceBuilder

  ablation/xp/eval
  HolobiomicsLab/Mimosa-AI#147 · Filter by author Fosowl opened on May 12, 2026

• Logprobs based methods to estimate steps of agents generation, informing workflow generation

  idea
  HolobiomicsLab/Mimosa-AI#131 · Filter by author Fosowl opened on Mar 23, 2026

• Idea: shared variables across SmolAgents

  idea
  HolobiomicsLab/Mimosa-AI#114 · Filter by author Fosowl opened on Feb 13, 2026

• Lower goal similarity threshold ablations on SAB to assert whenever cross workflow generalization is possible.

  ablation/xp/eval
  HolobiomicsLab/Mimosa-AI#112 · Filter by author Fosowl opened on Jan 28, 2026

• Planner adapt to workflow orchestration results

  HolobiomicsLab/Mimosa-AI#106 · Filter by author Fosowl opened on Jan 5, 2026