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Merged
labkey-adam merged 1 commit into from
May 26, 2026
Merged

Update copyrights and licenses #268

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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan001.sql
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/*
* Copyright (c) 2012-2019 LabKey Corporation
* Copyright (c) 2011-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan002.sql
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/*
* Copyright (c) 2012-2019 LabKey Corporation
* Copyright (c) 2011-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan003.sql
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/*
* Copyright (c) 2012-2019 LabKey Corporation
* Copyright (c) 2011-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan004.sql
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/*
* Copyright (c) 2012-2019 LabKey Corporation
* Copyright (c) 2011-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan006.sql
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/*
* Copyright (c) 2012-2019 LabKey Corporation
* Copyright (c) 2011-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan007.cd57.sql
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/*
* Copyright (c) 2012-2019 LabKey Corporation
* Copyright (c) 2011-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan007.excl.sql
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/*
* Copyright (c) 2012-2019 LabKey Corporation
* Copyright (c) 2011-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan007.sql
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/*
* Copyright (c) 2012-2019 LabKey Corporation
* Copyright (c) 2011-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan008.sql
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/*
* Copyright (c) 2012-2019 LabKey Corporation
* Copyright (c) 2011-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan009.excl.sql
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/*
* Copyright (c) 2012-2019 LabKey Corporation
* Copyright (c) 2011-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan009.sql
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/*
* Copyright (c) 2012-2019 LabKey Corporation
* Copyright (c) 2011-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan024.sql
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/*
* Copyright (c) 2012-2019 LabKey Corporation
* Copyright (c) 2011-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan048.sql
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/*
* Copyright (c) 2015 LabKey Corporation
* Copyright (c) 2020-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan049.sql
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/*
* Copyright (c) 2015 LabKey Corporation
* Copyright (c) 2021-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan050.sql
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/*
* Copyright (c) 2015 LabKey Corporation
* Copyright (c) 2021-2026 LabKey Corporation
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@labkey-jeckels labkey-jeckels May 25, 2026

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FWIW, history for this file goes back to 2009, though it's gone through a rename or copy to get here.

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@labkey-adam labkey-adam May 26, 2026

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Yep, Claude and I can't figure out how to follow all the renames/copies via jGit

*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan051.sql
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/*
* Copyright (c) 2015 LabKey Corporation
* Copyright (c) 2020-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan052.sql
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/*
* Copyright (c) 2015 LabKey Corporation
* Copyright (c) 2021-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan053.sql
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/*
* Copyright (c) 2015 LabKey Corporation
* Copyright (c) 2021-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan054.sql
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/*
* Copyright (c) 2015 LabKey Corporation
* Copyright (c) 2021-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan058.sql
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/*
* Copyright (c) 2015 LabKey Corporation
* Copyright (c) 2011-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan059.sql
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/*
* Copyright (c) 2015 LabKey Corporation
* Copyright (c) 2022-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan060.sql
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/*
* Copyright (c) 2015 LabKey Corporation
* Copyright (c) 2023-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan062.sql
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/*
* Copyright (c) 2015 LabKey Corporation
* Copyright (c) 2024-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan063.sql
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/*
* Copyright (c) 2015 LabKey Corporation
* Copyright (c) 2024-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan064.sql
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/*
* Copyright (c) 2015 LabKey Corporation
* Copyright (c) 2023-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan065.sql
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/*
* Copyright (c) 2015 LabKey Corporation
* Copyright (c) 2023-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan066.sql
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/*
* Copyright (c) 2015 LabKey Corporation
* Copyright (c) 2024-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan067.sql
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/*
* Copyright (c) 2015 LabKey Corporation
* Copyright (c) 2023-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan069.sql
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/*
* Copyright (c) 2015 LabKey Corporation
* Copyright (c) 2011-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan070.sql
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/*
* Copyright (c) 2015 LabKey Corporation
* Copyright (c) 2024-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan071.sql
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/*
* Copyright (c) 2015 LabKey Corporation
* Copyright (c) 2025-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan073.sql
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/*
* Copyright (c) 2015 LabKey Corporation
* Copyright (c) 2024-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan074.sql
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/*
* Copyright (c) 2015 LabKey Corporation
* Copyright (c) 2024-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlan077.sql
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/*
* Copyright (c) 2015 LabKey Corporation
* Copyright (c) 2025-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlanBase.sql
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/*
* Copyright (c) 2012-2019 LabKey Corporation
* Copyright (c) 2011-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/AnalysisPlanTemplate.sql
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/*
* Copyright (c) 2012-2019 LabKey Corporation
* Copyright (c) 2011-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/PassFail-12.sql
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/*
* Copyright (c) 2012-2019 LabKey Corporation
* Copyright (c) 2011-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/PassFail.sql
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/*
* Copyright (c) 2012-2019 LabKey Corporation
* Copyright (c) 2011-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/PassFailDetails-12.sql
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/*
* Copyright (c) 2012-2019 LabKey Corporation
* Copyright (c) 2011-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion hvtnFlow/resources/queries/flow/PassFailDetails.sql
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/*
* Copyright (c) 2012-2019 LabKey Corporation
* Copyright (c) 2011-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion ms2extensions/resources/schemas/dbscripts/postgresql/ms2extensions-0.00-13.30.sql
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/*
* Copyright (c) 2015-2019 LabKey Corporation
* Copyright (c) 2015-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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15 changes: 15 additions & 0 deletions ms2extensions/resources/schemas/dbscripts/postgresql/ms2extensions-26.000-26.001.sql
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/*
* Copyright (c) 2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
-- idx_ms2runaggregates_ms2run [ms2Run] overlaps with pk_ms2runaggregates [ms2Run]
DROP INDEX ms2extensions.idx_ms2runaggregates_ms2run;
2 changes: 1 addition & 1 deletion ms2extensions/resources/schemas/dbscripts/sqlserver/ms2extensions-0.00-13.30.sql
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/*
* Copyright (c) 2015-2019 LabKey Corporation
* Copyright (c) 2015-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion ms2extensions/src/org/labkey/ms2extensions/FilterView.java
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/*
* Copyright (c) 2013-2019 LabKey Corporation
* Copyright (c) 2013-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion ms2extensions/src/org/labkey/ms2extensions/MS2ExtensionsController.java
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/*
* Copyright (c) 2013-2019 LabKey Corporation
* Copyright (c) 2013-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion ms2extensions/src/org/labkey/ms2extensions/MS2ExtensionsExperimentRunType.java
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/*
* Copyright (c) 2014 LabKey Corporation
* Copyright (c) 2014-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion ms2extensions/src/org/labkey/ms2extensions/MS2ExtensionsModule.java
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/*
* Copyright (c) 2013-2019 LabKey Corporation
* Copyright (c) 2013-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion ms2extensions/src/org/labkey/ms2extensions/PeptideCountPepXmlDataHandler.java
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/*
* Copyright (c) 2015-2018 LabKey Corporation
* Copyright (c) 2015-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion ms2extensions/src/org/labkey/ms2extensions/PeptideCountUpdater.java
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/*
* Copyright (c) 2013-2019 LabKey Corporation
* Copyright (c) 2013-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion ms2extensions/src/org/labkey/ms2extensions/RunGridWebPart.java
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/*
* Copyright (c) 2013-2019 LabKey Corporation
* Copyright (c) 2013-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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2 changes: 1 addition & 1 deletion ms2extensions/src/org/labkey/ms2extensions/runGridFilters.jsp
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<%
/*
* Copyright (c) 2013-2019 LabKey Corporation
* Copyright (c) 2013-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
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15 changes: 15 additions & 0 deletions peptideInventory/resources/schemas/dbscripts/postgresql/peptideinventory-26.000-26.001.sql
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/*
* Copyright (c) 2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
-- Converting uq_lotassignment [peptideId, container, lotNumber] from unique to non-unique index because pk_lotassignment [peptideId, container] overlaps it with a smaller column set
ALTER TABLE peptideinventory.lotAssignment DROP CONSTRAINT uq_lotassignment;
CREATE INDEX ix_lotassignment ON peptideinventory.lotAssignment(peptideId, container, lotNumber);
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2 changes: 1 addition & 1 deletion peptideInventory/resources/web/peptideInventory/freezer.js
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/*
* Copyright (c) 2014-2019 LabKey Corporation
* Copyright (c) 2014-2026 LabKey Corporation
*
* Licensed under the Apache License, Version 2.0: http://www.apache.org/licenses/LICENSE-2.0
*/
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