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MCTP

Michigan Center for Translational Pathology (MCTP)

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  1. single-cell-Databases single-cell-Databases Public

    5 2

  2. lopass lopass Public

    Call variants from gVCF file.

    C++ 4 1

  3. cnvex cnvex Public

    CNVex

    R 2 1

  4. NSD2_req_subunit NSD2_req_subunit Public

    Code for Paper : NSD2 is a requisite subunit of the AR/FOXA1 neo-enhanceosome in promoting prostate tumorigenesis

    R 2 1

  5. hapster hapster Public

    Python 1

  6. cerberus cerberus Public

    Attentive multi-headed and highly trained companion to sequence-to-function deep-learning models

    Python 1

Repositories

Showing 10 of 15 repositories
  • cerberus Public

    Attentive multi-headed and highly trained companion to sequence-to-function deep-learning models

    mctp/cerberus’s past year of commit activity
    Python 1 0 0 0 Updated Apr 2, 2026
  • Stag2 Public

    Stag2 Paper code from chualec

    mctp/Stag2’s past year of commit activity
    Shell 0 0 0 0 Updated Dec 19, 2025
  • crispr-screen Public
    mctp/crispr-screen’s past year of commit activity
    Python 0 0 0 0 Updated Sep 22, 2025
  • FOXA1_GEMM Public
    mctp/FOXA1_GEMM’s past year of commit activity
    R 0 MIT 0 0 0 Updated Jun 10, 2025
  • lopass Public

    Call variants from gVCF file.

    mctp/lopass’s past year of commit activity
    C++ 4 MIT 1 1 0 Updated May 12, 2025
  • TahoeM100-tutorial Public

    This is a repository which hosts instructions to use the Tahoe100M dataset

    mctp/TahoeM100-tutorial’s past year of commit activity
    Python 0 MIT 0 0 0 Updated May 4, 2025
  • pysamstats Public Forked from alimanfoo/pysamstats

    A fast Python and command-line utility for extracting simple statistics against genome positions based on sequence alignments from a SAM or BAM file.

    mctp/pysamstats’s past year of commit activity
    Python 0 48 0 0 Updated Apr 6, 2025
  • tpo-public-v2.5 Public
    mctp/tpo-public-v2.5’s past year of commit activity
    R 0 0 0 0 Updated Nov 16, 2024
  • NSD2_req_subunit Public

    Code for Paper : NSD2 is a requisite subunit of the AR/FOXA1 neo-enhanceosome in promoting prostate tumorigenesis

    mctp/NSD2_req_subunit’s past year of commit activity
    R 2 Apache-2.0 1 0 0 Updated Jul 26, 2024
  • single-cell-Databases Public
    mctp/single-cell-Databases’s past year of commit activity
    5 MIT 2 0 0 Updated Jul 19, 2024
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