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fix mito handling in vivar samplesheet - #20

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nvnieuwk merged 2 commits into
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fix/vivar-mt
Nov 5, 2026
Merged

nvnieuwk merged 2 commits into
mainfrom
fix/vivar-mt

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@nvnieuwk nvnieuwk commented Nov 5, 2026

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This pull request addresses a bug in the vivar samplesheet logic and improves how sample IDs are handled. The main change ensures that filtering for mitochondrial samples and assigning the id field both consistently use the sample field rather than id, which improves accuracy and maintainability.

Bug fix and logic improvement in samplesheet handling:

  • Updated the vivar samplesheet logic to filter out mitochondrial samples based on the sample field instead of id, and set the id field to use the value from sample for consistency.
  • Documented this fix and its rationale in the CHANGELOG.md.

@nvnieuwk
nvnieuwk requested review from jhaezebr and matthdsm November 5, 2026 09:19
@nvnieuwk
nvnieuwk merged commit 2305e6c into main Nov 5, 2026
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@nvnieuwk
nvnieuwk deleted the fix/vivar-mt branch November 5, 2026 09:25
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2 participants