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@OchoaLab Ochoa Lab at Duke StatGen

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    23 repositories

    • nephrotic-syndrome

      Public
      R
      •0•0•0•0•Updated Apr 23, 2026Apr 23, 2026

    • meta-gwas-cryptic-inflation

      Public
      Testing the effect of between-study relatedness on GWAS meta-analysis
      R
      •0•0•0•0•Updated Apr 21, 2026Apr 21, 2026

    • bias-herit-paper

      Public
      Characterization of heritability estimation biases, from biased kinship matrices and other causes
      TeX
      •1•0•0•0•Updated Mar 21, 2026Mar 21, 2026

    • OchoaLab.github.io

      Public
      Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
      JavaScript
      •
      MIT License
      •0•0•0•0•Updated Mar 16, 2026Mar 16, 2026

    • ochoalabtools

      Public
      Handy plotting and other functions for internal/personal use.
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Dec 19, 2025Dec 19, 2025

    • kinshipsymbols

      Public
      LaTeX package with math symbols for statistical genetics models, particularly kinship coefficients, including options like colors and notation simplifications
      TeX
      •0•2•0•0•Updated Dec 11, 2025Dec 11, 2025

    • admixcor

      Public
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Dec 8, 2025Dec 8, 2025

    • domrec

      Public
      C++
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Sep 19, 2025Sep 19, 2025

    • genbin

      Public
      R wrappers for binaries in genetics
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Aug 14, 2025Aug 14, 2025

    • simtrait

      Public
      Simulate Complex Traits from Genotypes
      R
      •
      GNU General Public License v3.0
      •1•6•0•0•Updated Jul 8, 2025Jul 8, 2025

    • data

      Public
      Instructions for data processing shared across projects
      Shell
      •0•0•0•0•Updated Jun 16, 2025Jun 16, 2025

    • genomic-modules

      Public
      Teach use of public resources to advance research of a diverse workforce
      Jupyter Notebook
      •
      MIT License
      •0•1•0•0•Updated May 15, 2025May 15, 2025

    • bias-assoc-paper

      Public
      Kinship bias association project
      TeX
      •1•0•0•0•Updated May 11, 2025May 11, 2025

    • popgeninfer

      Public
      Population Genetics Inference
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Mar 31, 2025Mar 31, 2025

    • genio

      Public
      Statistical GENetics Input/Output Functions
      R
      •
      GNU General Public License v3.0
      •3•18•3•1•Updated Feb 20, 2025Feb 20, 2025

    • simfam

      Public
      Simulate and Model Family Pedigrees With Structured Founders
      R
      •
      GNU General Public License v3.0
      •0•3•0•0•Updated Jan 8, 2025Jan 8, 2025

    • grantModelCanvas

      Public
      LaTeX version of the Grant Model Canvas for Developing Great Grants
      TeX
      •3•8•0•0•Updated Apr 28, 2023Apr 28, 2023

    • popkinsuppl

      Public
      Supplement to popkin package
      R
      •
      GNU General Public License v3.0
      •0•4•0•0•Updated Apr 28, 2023Apr 28, 2023

    • ligera

      Public
      LIght GEnetic Robust Association
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Apr 28, 2023Apr 28, 2023

    • pca-assoc-paper

      Public
      PCA association project
      TeX
      •0•0•0•0•Updated Apr 24, 2023Apr 24, 2023

    • simgenphen

      Public
      Simulate Genotypes and Phenotypes (wrapper of bnpsd, simfam, and simtrait)
      R
      •
      GNU General Public License v3.0
      •0•2•0•0•Updated Feb 2, 2023Feb 2, 2023

    • template-response

      Public
      Template for response to peer review of scientific article
      TeX
      •0•1•0•0•Updated Jan 24, 2023Jan 24, 2023

    • polygenr

      Public
      Methods for polygenic models
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Feb 25, 2022Feb 25, 2022
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