Building the features table
First build the echodata and ventdurations tables using scripts from the mimic-code repository
src/Makefile mimic-code/etc/echodata
src/Makefile mimic-code/etc/ventilation-durations
src/Makefile mimic-code/severityscores/apsiii
src/Makefile mimic-code/comorbidity/elixhauser-ahrq-v37-with-drg.sql
Build the individual echo features tables
Match echos with ICU stays
src/Makefile src/echo_icustay
Load the excluded diagnoses from CSV file in resources
src/Makefile src/d_diagnoses_xc_annot
Build table of prescriptions that are considered vasopressors
src/Makefile src/d_prescriptions_vaso
src/Makefile src/echo_outpatient
Calculate variables associated with inclusion/exclusion criteria
src/Makefile src/echo_filter_vars
Calculate lab value features
src/Makefile src/echo_features_labs
Calculate ventilator features
src/Makefile src/venttype
src/Makefile src/ventfeatures
Calculate if patient is on chronic dialysis
src/Makefile src/chronic_dialysis
src/Makefile src/create_echo_annotations
Build the master features table
src/Makefile src/echo_features
Get the final filtered table
src/Makefile src/echo_filtered